Package index • LODopt

Core functions

Primary analysis functions

logodds_optimized_normFactors(): logodds_optimized_normFactors
simulate_cellCounts_fromTissue(): simulate_cellCounts_fromTissue
estimate_variance_w_args(): estimate_variance_w_args
ineqfun_data(): ineqfun_data

Seurat object input

Helpers for working with Seurat objects

prepare_from_seurat(): Prepare LODopt input from a Seurat object

Data

Built-in example datasets

mock_seurat_data: Mock single-cell data for Seurat workflow examples